Publications and Case Studies

Proteomics core:

Collaborations:

• Lee YJ, Rice RH, Lee YM.
  Proteome analysis of human hair shaft: from protein identification to posttranslational modification.
  Mol Cell Proteomics. 2006 May;5(5):789-800. Epub 2006 Jan 30.
  PMID: 16446289 [PubMed - indexed for MEDLINE]


• Werner JA, Kasten RW, Feng S, Sykes JE, Hodzic E, Salemi MR, Barthold SW, Chomel BB.
  Experimental infection of domestic cats with passaged genotype I Bartonella henselae.
  Vet Microbiol. 2007 Jun 21;122(3-4):290-7. Epub 2007 Jan 31.
  PMID: 17321078 [PubMed - in process]


• Fenyo D, Phinney BS, Beavis RC.
  Determining the overall merit of protein identification data sets: rho-diagrams and rho-scores.
  J Proteome Res. 2007 May;6(5):1997-2004. Epub 2007 Mar 31.
  PMID: 17397212 [PubMed - in process]


• Eigenheer RA, Jin Lee Y, Blumwald E, Phinney BS, Gelli A.
  Extracellular glycosylphosphatidylinositol-anchored mannoproteins and proteases of Cryptococcus neoformans.
  FEMS Yeast Res. 2007 Jun;7(4):499-510. Epub 2007 Jan 19.
  PMID: 17233760 [PubMed - in process]


• Katz E, Fon M, Lee YJ, Phinney BS, Sadka A, Blumwald E.
  The citrus fruit proteome: insights into citrus fruit metabolism.
  Planta. 2007 May 31; [Epub ahead of print]
  PMID: 17541628 [PubMed - as supplied by publisher]


• Lin MK, Belanger H, Lee YJ, Varkonyi-Gasic E, Taoka KI, Miura E, Xoconostle-Cazares B, Gendler K, Jorgensen RA, Phinney B, Lough TJ, Lucas WJ.
  FLOWERING LOCUS T Protein May Act as the Long-Distance Florigenic Signal in the Cucurbits.
  Plant Cell. 2007 May 31; [Epub ahead of print]
  PMID: 17540715 [PubMed - as supplied by publisher]


• Turck CW, Falick AM, Kowalak JA, Lane WS, Lilley KS, Phinney BS, Weintraub ST, Witkowska HE, Yates NA.
  ABRF-PRG2006 study: Relative protein qQuantitation.
  Mol Cell Proteomics. 2007 May 18; [Epub ahead of print]
  PMID: 17513294 [PubMed - as supplied by publisher]

Publications for which Proteomics Data was generated in the Proteomics Core Facility:

• Park KS, Mohapatra DP, Misonou H, Trimmer JS.
  Graded regulation of the Kv2.1 potassium channel by variable phosphorylation.
  Science. 2006 Aug 18;313(5789):976-9.
  PMID: 16917065 [PubMed - indexed for MEDLINE]


• Damoc E, Fraser CS, Zhou M, Videler H, Mayeur GL, Hershey JW, Doudna JA, Robinson CV, Leary JA.
  Structural characterization of the human eukaryotic initiation factor 3 protein complex by mass spectrometry.
  Mol Cell Proteomics. 2007 Feb 23; [Epub ahead of print]
  PMID: 17322308 [PubMed - as supplied by publisher]

Metabolomics core:

A comprehensive urinary metabolomic approach for identifying kidney cancer.
Tobias Kind, Vladimir Tolstikov, Oliver Fiehn and Robert H. Weiss.
Analytical Biochemistry, Volume 363, Issue 2, 15 April 2007, Pages 185-195.